Dot-Bracket

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fjucks
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Joined: 04/23/2012

I wonder if there is some form of UNAfold or Mfold to have the output dot-bracket, as in

((((((((((................ (((..))) ..............)) ))))))))

or if there is a converter, please contact

Professor, how do I get the secondary structures in this format (dotBracket) Ct2B.pl used the script that you passed?

which file I pass to the script for the structures in these formats?

zukerm
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Joined: 11/12/2010

Download the Ct2B.pl Perl script.